CDS

Accession Number TCMCG057C45751
gbkey CDS
Protein Id XP_018449082.1
Location join(16243140..16243547,16243628..16243816,16243907..16243975,16244072..16244178,16244270..16244348,16244548..16244721,16244901..16245049,16245133..16245228,16245328..16245430,16245517..16245579,16245664..16245725,16245830..16245926,16246026..16246144,16246217..16246259,16246345..16246446,16246544..16246636,16246725..16246844,16246924..16247231,16247356..16247371)
Gene LOC108820605
GeneID 108820605
Organism Raphanus sativus

Protein

Length 798aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018593580.1
Definition PREDICTED: DEAD-box ATP-dependent RNA helicase 28 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category A
Description Helicase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13181        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010501        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCCGGAGCCTTCTTCTACGACGCGGCTAGCGACGACGATCTCGAATTCCTAAACCACGAAGACGAGAGTAGCGAGGAGGATGTAGCACCAGAAGATCGTAAAGCTCGAGAAGACGAAGAAGGAGAAGATAGCGAAGTTGAGGATGAAGAAGACGATGACGATGACGACGACGACGACGAAGAAGAAGAAGATGAGAAGACTACAAGGAAAGGAAACACCGACGCTCAATCTCCTTGGGATTTCGCTTCTTACTCGAGCTCCGTCGGGGAAGAACACGCCCGCCGTCACACAACGTCCATCGATGAGAAGATCTCAAAAGCTATCAAGCATCGTCCCCTTCCTATCTCCACAGAGGAGGAGGAAGAAGAGGAAGAAGATGTCTCCGAGGCTGAACCTGACAAACAAGAGGAGTATCTTTCTGAAGACGAAGAAGCAGCTGATTCGAAAGCTGCAGATAATGTTGCTGCCAAGCCGTTCTTCTCTACTGTGGATGGAGTTTCGTTTCATGCCAACTCTTTCATGCAGCTTAACCTCTCTCGTCCGTTGCTTCTAGCTTGTGAAAGTCTTGGATACAAGAAACCTACTCCTATCCAGGCAGCTTGTATACCTTTGGCGCTTACAGGGCGTGATCTTTGTGCTAGTGCAATCACTGGTTCTGGGAAGACTGCTGCGTTCGCTTTGCCTACTCTCGAGAGGTTGCTGTTCCGTCCTAAGCGGGTCTTTGCTACTAGGGTTCTTATTCTCACTCCGACGAGGGAGTTGGCTGTCCAGATTCACAGTATGATTCAGAAGCTTGCACAGTTTACTGATATCAAATGTGGATTGATTGTTGGAGGGCTTTCTGTAAGGGAGCAAGAGGTTGTTTTGAGGTCTATGCCAGATATTGTTGTCGCTACTCCTGGACGTATGATAGATCATTTGCGTAATTCGATGTCTGTCGATTTGGATGATCTAGCGGTTTTGATTCTCGATGAAGCAGATCGTCTTCTACAGACTGGATTTGCCACTGAAATACAAGAGCTGGTTCGGTTATGTCCCAGGAGAAGGCAAACAATGCTCTTCTCAGCCACAATGACTGAAGAAGTTAAAGAGCTTGTTAAACTTTCCTTGAACAAACCATTGCGTCTCTCAGCTGATCCATCAGCTAGAAGGCCTCCAGGCCTGACCGAAGAGGTGGTAAGAATACGTAGGACCCGTGAGGCAAATCAGGAAGCTGTTCTTCTTTCATTATGCACAAGAACTTTTAAATCAAAAGTCATCATCTTTAGTGGAACAAAACAGGCTGCGCATAGACTGAAAATTTTATTCGGACTAGCTGGCCTCAAAGCAGCTGAGCTTCATGGAAACCTTACTCAAGCACAACGTCTTGATTCTCTGGAACTTTTCAGAAAGCAAGAGGTTGATTATCTCATTGCGACCGATGTGGCTGCTCGAGGGCTTGATATTATTGGTGTCCAAACTGTTATAAATTATGCCTGTCCTCGTGAAATAGACAGTTATGTTCACAGAGTTGGTAGAACAGCTAGGGCTGGAAGAGAAGGTTATGCTGTAACCTTTGTGACTGACAATGACCGATCCCTTTTGAAAGTCATTGCAAAGAAGGTGGGTTCAAAGTTGAAGAGCAGAATCATCCCAGAGCAGTCAATCGTCAAGTGGTCTCAGATAATCGATGAAATGGAAGATCAATACTCTGCTGTTATTCGACTAGAGAGGGAAGAGCGAGCTCTAAGGAAAGCTGAAATGGAATTTGCAAAGGCAGAGAACATGATTGAGCACAGAGATGAAATATACGCACGGCCAAAAAGGACTTGGTTCATGACAGAGAAGGAGAAGAAACTCGTAGCCAAAGCTGAAAAGGATTCTGCAGGAAACCCTTCTGGAAACGAACTAGTTAGTGCTGATATAGCAGAGGACCTCAAGATGAAGGAGAAGAGAAAACGCGAACGCGAGAAGAATCTTCCAAGGAAAAAACGTAGAAAGCTTGAAGCTGCCAGAGAGATGCTAGAGGATAACGAAGAAGAAGAAGACGAGGAGGAAGAAGGAGAAGACGAAAAACGAGGAAGATCAAGAGGGAAAGACAAGAAGAAGAAGAAAGAAGATCCAGAGAAGAAAGGATTGACACTAGTGGATCTTGGTTACAGGCGAGCAAAGGCCGTAAAAGCAAAACAGAGAGCAATTGATTCCGGTAAGATGGATAGACCAACGCCGGACAAGAGAAAGAACCTAAACCGGAGTAAACCAAAAACACAGCCTAGAAATGAAGAGATGAAAGATCTGTTCAAGAGTGATATGAGCGACAAGAAACAAGGCAGAGGCGGAGCCGGGGCTTCAGCGAAACCTAAGGGCAAGTCGAAGAACTCTTTCAAGAGCAAAGGCCGATACAAGCGTAGGTAA
Protein:  
MSGAFFYDAASDDDLEFLNHEDESSEEDVAPEDRKAREDEEGEDSEVEDEEDDDDDDDDDEEEEDEKTTRKGNTDAQSPWDFASYSSSVGEEHARRHTTSIDEKISKAIKHRPLPISTEEEEEEEEDVSEAEPDKQEEYLSEDEEAADSKAADNVAAKPFFSTVDGVSFHANSFMQLNLSRPLLLACESLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRVFATRVLILTPTRELAVQIHSMIQKLAQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEIQELVRLCPRRRQTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLSLCTRTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDYLIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGREGYAVTFVTDNDRSLLKVIAKKVGSKLKSRIIPEQSIVKWSQIIDEMEDQYSAVIRLEREERALRKAEMEFAKAENMIEHRDEIYARPKRTWFMTEKEKKLVAKAEKDSAGNPSGNELVSADIAEDLKMKEKRKREREKNLPRKKRRKLEAAREMLEDNEEEEDEEEEGEDEKRGRSRGKDKKKKKEDPEKKGLTLVDLGYRRAKAVKAKQRAIDSGKMDRPTPDKRKNLNRSKPKTQPRNEEMKDLFKSDMSDKKQGRGGAGASAKPKGKSKNSFKSKGRYKRR